Domain ID e3e1b11

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 000369754
Type: Automatic domain
Parent: e1dmgA1
Range: 1:1-201
PDB: 3e1b
PDB Description:
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e3e1b11

Domains in the same chain:

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e3e1b11 1:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e3e1b11 1:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3e1b21 2:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3e1b32 3:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3e1b31 3:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3e1b42 4:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3e1b52 5:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3e1b51 5:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3e1b61 6:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3e1bC1 C:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3e1bD1 D:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3e1bG1 G:1-127 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3e1bH1 H:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3e1bK1 K:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3e1bL1 L:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3e1bM1 M:1-99 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3e1bN1 N:3-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3e1bN2 N:125-269 SH3 SH3 SH3
e3e1bO1 O:1-102 SH3 SH3 SH3
e3e1bP1 P:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3e1bQ1 Q:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3e1bR1 R:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3e1bS1 S:1-70 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3e1bT1 T:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3e1bV1 V:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3e1bW1 W:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3e1bX1 X:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3e1bZ1 Z:1-57,Z:154-217 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3e1bZ2 Z:58-153 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1

Structural contacts of domain e3e1b11 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dmgA1 1:X,Y,Z->E:x,y,z Ribosomal protein L4 Interaction Interface Pymol
e3e1bL1 1:X,Y,Z->L:x,y,z Ribosomal protein L22 Interaction Interface Pymol