Domain ID e3e1d61

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 000369818
Type: Automatic domain
Parent: e4v19N1
Range: 6:1-140
PDB: 3e1d
PDB Description:
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e3e1d61

Domains in the same chain:

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e3e1d61 6:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e3e1d11 1:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3e1d21 2:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3e1d32 3:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3e1d31 3:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3e1d42 4:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3e1d52 5:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3e1d51 5:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3e1d61 6:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3e1dC1 C:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3e1dD1 D:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3e1dG1 G:1-127 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3e1dH1 H:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3e1dK1 K:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3e1dL1 L:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3e1dM1 M:1-99 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3e1dN1 N:3-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3e1dN2 N:125-269 SH3 SH3 SH3
e3e1dO1 O:1-102 SH3 SH3 SH3
e3e1dP1 P:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3e1dQ1 Q:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3e1dR1 R:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3e1dS1 S:1-70 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3e1dT1 T:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3e1dV1 V:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3e1dW1 W:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3e1dX1 X:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3e1dZ1 Z:1-57,Z:154-217 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3e1dZ2 Z:58-153 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1

Structural contacts of domain e3e1d61 of H-group "Ribosomal protein L13 and L16-A":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4v19N1 6:X,Y,Z->J:x,y,z Ribosomal protein L13 and L16-A Interaction Interface Pymol
e4v19N1 6:X,Y,Z->Y:x,y,z Ribosomal protein L13 and L16-A Interaction Interface Pymol
e3e1dK1 6:X,Y,Z->K:x,y,z Ribosomal protein L21p Interaction Interface Pymol