| UID: | 001175748 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3gplA2 |
| Range: | A:286-478,A:700-720 |
| PDB: | 3e1s |
| PDB Description: | Exodeoxyribonuclease V, subunit RecD |
| UniProt: | Q9RT63 |
| Species: | Deinococcus radiodurans |
Structure of domain e3e1sA6
Domains in the same chain:
| e3e1sA7 | A:193-285 | HTH | HTH | winged |
| e3e1sA6 | A:286-478,A:700-720 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3e1sA4 | A:479-559,A:626-699 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3e1sA5 | A:560-625 | SH3 | SH3 | SH3 |
Domains in the same PDB:
| e3e1sA7 | A:193-285 | HTH | HTH | winged |
| e3e1sA6 | A:286-478,A:700-720 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3e1sA4 | A:479-559,A:626-699 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3e1sA5 | A:560-625 | SH3 | SH3 | SH3 |
Structural contacts of domain e3e1sA6 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3e1sA7 | A:x,y,z->A:-X,Y-1/2,-Z+1/2 | HTH | Interaction Interface Pymol |
| e3e1sA4 | A:x,y,z->A:-X,Y-1/2,-Z+1/2 | P-loop domains-related | Interaction Interface Pymol |
| e3e1sA5 | A:x,y,z->A:-X,Y-1/2,-Z+1/2 | SH3 | Interaction Interface Pymol |
| e3e1sA4 | A:x,y,z->A:X-1/2,-Y-1/2,-Z | P-loop domains-related | Interaction Interface Pymol |
| e3e1sA5 | A:x,y,z->A:-X-1,Y-1/2,-Z+1/2 | SH3 | Interaction Interface Pymol |
