Domain ID e3e3jC3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RNA_pol
UID: 001877874
Type: Automatic domain
Parent: e1mswD5
Range: C:529-552,C:780-883
PDB: 3e3j
PDB Description: DNA-directed RNA polymerase
UniProt: P00573
Species: Enterobacteria phage T7

Structure of domain e3e3jC3

Domains in the same chain:

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e3e3jC6 C:8-262 HTH HTH HTH in T7 RNA polymerase
e3e3jC7 C:263-448 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e3e3jC4 C:449-528 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e3e3jC3 C:529-552,C:780-883 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3e3jC5 C:553-779 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e3e3jB5 B:8-262 HTH HTH HTH in T7 RNA polymerase
e3e3jB6 B:263-448 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e3e3jB1 B:449-528 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e3e3jB2 B:529-552,B:780-883 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3e3jB4 B:553-779 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e3e3jC6 C:8-262 HTH HTH HTH in T7 RNA polymerase
e3e3jC7 C:263-448 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e3e3jC4 C:449-528 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e3e3jC3 C:529-552,C:780-883 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3e3jC5 C:553-779 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e3e3jC3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3e3jB2 C:x,y,z->B:-X-1,Y-1/2,-Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3e3jB1 C:x,y,z->B:-X-1,Y-1/2,-Z-1/2 inserted helical bundle subdomain in T7 RNA polymerase Interaction Interface Pymol