| UID: | 000367444 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1e1oA2 |
| Range: | D:145-492 |
| Ligands: | 1PE MG XAH |
| PDB: | 3e9i |
| PDB Description: | Lysyl-tRNA synthetase |
| UniProt: | Q9RHV9 |
| Hsap BLAST neighbor: | Q15046 |
| Species: | Geobacillus stearothermophilus |
Structure of domain e3e9iD2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3e9iD2 of H-group "Class II aaRS and biotin synthetases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3e9iC1 | D:x,y,z->C:X,Y,Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3e9iC2 | D:x,y,z->C:X,Y,Z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3e9iA2 | D:X-1,Y,Z->A:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3e9iA1 | D:X-1,Y,Z->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3e9iA2 | D:X-1,Y+1,Z->A:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3e9iB1 | D:x,y,z->B:-X+3,Y-1/2,-Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3e9iA2 | D:x,y,z->A:-X+2,Y-1/2,-Z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3e9iC1 | D:x,y,z->C:-X+3,Y-1/2,-Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3e9iC1 | D:x,y,z->C:X,Y-1,Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3e9iB2 | D:x,y,z->B:X,Y-1,Z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3e9iB2 | D:X-1,Y+1,Z->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3e9iA1 | D:x,y,z->A:X,Y,Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
