ECOD: domain e3e9rB1

Domain ID e3e9rB1

A: a/b three-layered sandwiches
X: Phosphorylase/hydrolase-like
H: Peptidyl-tRNA hydrolase-like
T: Peptidyl-tRNA hydrolase-like
F: PNP_UDP_1

UID:	000371068
Type:	Automatic domain
Parent:	e3pnpA1
Range:	B:4-287
Ligands:	ADE DMS SO4
PDB:	3e9r
PDB Description:	Purine-nucleoside phosphorylase
UniProt:	Q9BMI9
Hsap BLAST neighbor:	P00491
Species:	Schistosoma mansoni

Domains in the same chain:

Download Pymol

e3e9rB1	B:4-287	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

e3e9rA1	A:3-287	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e3e9rB1	B:4-287	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e3e9rC1	C:4-287	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like

Structural contacts of domain e3e9rB1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3e9rA1	B:x,y,z->A:X,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rC1	B:X,Y,Z->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rA1	B:-X+1/2,-Y,Z-1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rA1	B:-X+1,Y-1/2,-Z+1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rB1	B:x,y,z->B:X-1/2,-Y+1/2,-Z+1	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rB1	B:X-1/2,-Y+1/2,-Z+1->B:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rB1	B:x,y,z->B:X-1,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rB1	B:X-1,Y,Z->B:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rA1	B:-X+3/2,-Y,Z-1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3e9rA1	B:-X,Y-1/2,-Z+1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol