ECOD: domain e3ec1A1

Domain ID e3ec1A1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: MMR_HSR1

UID:	000350440
Type:	Automatic domain
Parent:	e2gj8A1
Range:	A:59-229
Ligands:	GDP
PDB:	3ec1
PDB Description:	GTP-binding protein YqeH required for biosis of 30S ribosome subunit
UniProt:	D0VWU7
Hsap BLAST neighbor:	Q8NC60
Species:	Geobacillus stearothermophilus

Domain
In chain context
In PDB context

Structure of domain e3ec1A1

Domains in the same chain:

Download Pymol

e3ec1A1	A:59-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3ec1A2	A:230-369	beta-sandwich domain in YqeH GTPase	beta-sandwich domain in YqeH GTPase	beta-sandwich domain in YqeH GTPase

Domains in the same PDB:

e3ec1A1	A:59-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3ec1A2	A:230-369	beta-sandwich domain in YqeH GTPase	beta-sandwich domain in YqeH GTPase	beta-sandwich domain in YqeH GTPase
e3ec1B1	B:59-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3ec1B2	B:230-369	beta-sandwich domain in YqeH GTPase	beta-sandwich domain in YqeH GTPase	beta-sandwich domain in YqeH GTPase

Structural contacts of domain e3ec1A1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ec1A2	A:-X+1,Y-1/2,-Z->A:x,y,z	beta-sandwich domain in YqeH GTPase	Interaction Interface Pymol
e3ec1A2	A:-X,Y-1/2,-Z->A:x,y,z	beta-sandwich domain in YqeH GTPase	Interaction Interface Pymol
e3ec1A2	A:x,y,z->A:X-1,Y,Z	beta-sandwich domain in YqeH GTPase	Interaction Interface Pymol