ECOD: domain e3eh2B15

Domain ID e3eh2B15

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: zf-Sec23_Sec24

UID:	001247488
Type:	Automatic domain
Parent:	e1pd0A4
Range:	B:15-171
Ligands:	ZN
PDB:	3eh2
PDB Description:	Protein transport protein Sec24C
UniProt:	P53992
Hsap BLAST neighbor:	P53992
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3eh2B15	B:15-171	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e3eh2B4	B:170-493	HAD domain-like	HAD domain-related	vWA-like
e3eh2B16	B:494-621	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e3eh2B14	B:622-767	Gelsolin-like	Gelsolin-like	Gelsolin-like

Domains in the same PDB:

e3eh2A3	A:2-170	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e3eh2A5	A:170-493	HAD domain-like	HAD domain-related	vWA-like
e3eh2A4	A:494-615	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e3eh2A2	A:616-767	Gelsolin-like	Gelsolin-like	Gelsolin-like
e3eh2B15	B:15-171	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e3eh2B4	B:170-493	HAD domain-like	HAD domain-related	vWA-like
e3eh2B16	B:494-621	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e3eh2B14	B:622-767	Gelsolin-like	Gelsolin-like	Gelsolin-like
e3eh2C23	C:4-171	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e3eh2C4	C:170-493	HAD domain-like	HAD domain-related	vWA-like
e3eh2C24	C:494-621	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e3eh2C22	C:622-767	Gelsolin-like	Gelsolin-like	Gelsolin-like

Structural contacts of domain e3eh2B15 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3eh2C24	B:-X,Y-1/2,-Z+1/2->C:x,y,z	Helical domain of Sec23/24	Interaction Interface Pymol
e3eh2C23	B:-X,Y-1/2,-Z+1/2->C:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e3eh2C23	B:-X+1/2,-Y,Z-1/2->A:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e3eh2A4	B:-X+1/2,-Y,Z-1/2->A:x,y,z	Helical domain of Sec23/24	Interaction Interface Pymol
e3eh2A4	B:X,Y,Z->C:x,y,z	Helical domain of Sec23/24	Interaction Interface Pymol