Domain ID e3eicD1

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Nucleoside diphosphate kinases
  • T: Nucleoside diphosphate kinases
  • F: NDK
UID: 000365582
Type: Automatic domain
Parent: e3bbbA1
Range: D:0-131
Ligands: MG UDP
PDB: 3eic
PDB Description: NUCLEOSIDE DIPHOSPHATE KINASE
UniProt: Q5UQL3
Hsap BLAST neighbor: Q13232
Species: Acanthamoeba polyphaga mimivirus

Structure of domain e3eicD1

Structural contacts of domain e3eicD1 of H-group "Nucleoside diphosphate kinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3eicF1 D:-X+2,Y,-Z+1/2->F:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3eicF1 D:X,Y,Z->F:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3eicB1 D:x,y,z->B:X,Y,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e3eicA1 D:x,y,z->A:-X+1,Y,-Z+1/2 Nucleoside diphosphate kinases Interaction Interface Pymol
e3eicE1 D:-X+1,Y,-Z+1/2->E:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3eicB1 D:x,y,z->B:-X+2,Y,-Z+1/2 Nucleoside diphosphate kinases Interaction Interface Pymol