Domain ID e3equA3

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  • A: beta complex topology
  • X: Penicillin binding protein dimerisation domain
  • H: Penicillin binding protein dimerisation domain
  • T: Penicillin binding protein dimerisation domain
  • F: PBP_dimer
UID: 001758873
Type: Automatic domain
Parent: e1rp5A6
Range: A:63-92,A:164-238
Ligands: GOL SO4
PDB: 3equ
PDB Description: PENICILLIN-BINDING PROTEIN 2
UniProt: P08149
Species: Neisseria gonorrhoeae

Structure of domain e3equA3

Domains in the same chain:

e3equA3 A:63-92,A:164-238 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3equA1 A:239-305,A:424-573 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3equA2 A:306-424 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e3equA3 A:63-92,A:164-238 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3equA1 A:239-305,A:424-573 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3equA2 A:306-424 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3equB4 B:65-91,B:164-238 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3equB2 B:237-291,B:412-573 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3equB3 B:307-404 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e3equA3 of H-group "Penicillin binding protein dimerisation domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rp5A6 A:x,y,z->B:X-1,Y,Z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e3equB3 A:x,y,z->B:X-1,Y,Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3equA2 A:x,y,z->A:X-1,Y,Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3equA2 A:x,y,z->B:X-1/2,-Y+1/2,-Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol