ECOD: domain e3equA3

Domain ID e3equA3

A: beta complex topology
X: Penicillin binding protein dimerisation domain
H: Penicillin binding protein dimerisation domain
T: Penicillin binding protein dimerisation domain
F: PBP_dimer

UID:	001758873
Type:	Automatic domain
Parent:	e1rp5A6
Range:	A:63-92,A:164-238
Ligands:	GOL SO4
PDB:	3equ
PDB Description:	PENICILLIN-BINDING PROTEIN 2
UniProt:	P08149
Species:	Neisseria gonorrhoeae

Domains in the same chain:

Download Pymol

e3equA3	A:63-92,A:164-238	Penicillin binding protein dimerisation domain	Penicillin binding protein dimerisation domain	Penicillin binding protein dimerisation domain
e3equA1	A:239-305,A:424-573	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e3equA2	A:306-424	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e3equA3	A:63-92,A:164-238	Penicillin binding protein dimerisation domain	Penicillin binding protein dimerisation domain	Penicillin binding protein dimerisation domain
e3equA1	A:239-305,A:424-573	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e3equA2	A:306-424	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3equB4	B:65-91,B:164-238	Penicillin binding protein dimerisation domain	Penicillin binding protein dimerisation domain	Penicillin binding protein dimerisation domain
e3equB2	B:237-291,B:412-573	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e3equB3	B:307-404	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e3equA3 of H-group "Penicillin binding protein dimerisation domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1rp5A6	A:x,y,z->B:X-1,Y,Z	Penicillin binding protein dimerisation domain	Interaction Interface Pymol
e3equB3	A:x,y,z->B:X-1,Y,Z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e3equA2	A:x,y,z->A:X-1,Y,Z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e3equA2	A:x,y,z->B:X-1/2,-Y+1/2,-Z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol