ECOD: domain e3er0B4

Domain ID e3er0B4

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: eIF-5a

UID:	001263799
Type:	Automatic domain
Parent:	e1bkbA1
Range:	B:85-151
PDB:	3er0
PDB Description:	EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-2
UniProt:	P23301
Hsap BLAST neighbor:	Q9GZV4
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e3er0B4

Domains in the same chain:

Download Pymol

e3er0B3	B:17-84	SH3	SH3	SH3
e3er0B4	B:85-151	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e3er0A4	A:12-80	SH3	SH3	SH3
e3er0A3	A:81-157	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3er0B3	B:17-84	SH3	SH3	SH3
e3er0B4	B:85-151	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e3er0B4 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3er0A4	B:-Y-1,-X,-Z+1/6->A:x,y,z	SH3	Interaction Interface Pymol
e3er0B3	B:x,y,z->B:-Y,-X,-Z+1/6	SH3	Interaction Interface Pymol
e3er0B4	B:x,y,z->B:-Y,-X,-Z+1/6	Nucleic acid-binding proteins	Interaction Interface Pymol
e3er0B3	B:-Y,-X,-Z+1/6->B:x,y,z	SH3	Interaction Interface Pymol
e3er0B4	B:-Y,-X,-Z+1/6->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3er0A4	B:x,y,z->A:-Y,-X,-Z+1/6	SH3	Interaction Interface Pymol
e3er0A4	B:x,y,z->A:X,Y-1,Z	SH3	Interaction Interface Pymol
e3er0A3	B:X-Y-1,X-1,Z-1/6->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3er0B4	B:x,y,z->B:-Y-1,-X-1,-Z+1/6	Nucleic acid-binding proteins	Interaction Interface Pymol
e3er0B4	B:-Y-1,-X-1,-Z+1/6->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol