Domain ID e3etmA1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Nucleoside diphosphate kinases
  • T: Nucleoside diphosphate kinases
  • F: NDK
UID: 000369366
Type: Automatic domain
Parent: e3bbbA1
Range: A:2-134
Ligands: CDP
PDB: 3etm
PDB Description: Nucleoside diphosphate kinase
UniProt: Q5UQL3
Hsap BLAST neighbor: Q13232
Species: Acanthamoeba polyphaga mimivirus

Structure of domain e3etmA1

Structural contacts of domain e3etmA1 of H-group "Nucleoside diphosphate kinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3etmB1 A:X,Y,Z->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3etmA1 A:x,y,z->A:-Y+1,X-Y,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e3etmA1 A:-Y+1,X-Y,Z->A:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3etmB1 A:x,y,z->B:X-Y,X-1,Z+1/2 Nucleoside diphosphate kinases Interaction Interface Pymol
e3etmB1 A:-X+2,-Y+1,Z-1/2->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3etmA1 A:x,y,z->A:-Y+1,X-Y-1,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e3etmA1 A:-Y+1,X-Y-1,Z->A:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol