Domain ID e3eubL4

Download files:
  • A: a+b two layers
  • X: MocoBD/DmpA-related
  • H: MocoBD/DmpA-related
  • T: Molybdenum cofactor-binding domain
  • F: MoCoBD_1
UID: 001873293
Type: Automatic domain
Parent: e1v97A7
Range: L:694-954
Ligands: FES MOM MTE XAN
PDB: 3eub
PDB Description: Xanthine dehydrogenase/oxidase
UniProt: P80457
Hsap BLAST neighbor: P47989
Species: Bos taurus

Structure of domain e3eubL4

Domains in the same chain:

e3eubL2 L:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3eubL4 L:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubL3 L:955-1315 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e3eub22 2:2-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3eub21 2:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3eub32 3:224-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3eub31 3:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3eub42 4:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3eub44 4:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eub43 4:955-1326 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubA2 A:4-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3eubA1 A:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3eubB2 B:224-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3eubB1 B:415-527 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3eubC2 C:572-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3eubC4 C:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubC3 C:955-1324 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubJ2 J:4-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3eubJ1 J:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3eubK2 K:226-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3eubK1 K:415-527 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3eubL2 L:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3eubL4 L:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubL3 L:955-1315 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubS2 S:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3eubS1 S:93-163 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3eubT2 T:224-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3eubT1 T:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3eubU2 U:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3eubU4 U:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3eubU3 U:955-1315 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e3eubL4 of H-group "MocoBD/DmpA-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3eubC4 L:x,y,z->C:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e3eubC2 L:x,y,z->C:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3eubC3 L:x,y,z->C:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e3eubJ2 L:x,y,z->J:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e3eubJ1 L:x,y,z->J:X,Y,Z CO dehydrogenase ISP C-domain like Interaction Interface Pymol
e3eubK2 L:x,y,z->K:X,Y,Z FAD-binding domain Interaction Interface Pymol
e3eubC3 L:X,Y-1,Z->C:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e3eubA1 L:x,y,z->A:X,Y,Z CO dehydrogenase ISP C-domain like Interaction Interface Pymol