Domain ID e3exeD2

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: Transket_pyr
UID: 000352778
Type: Automatic domain
Parent: e2r8oA2
Range: D:1-191
Ligands: GOL K TPP
PDB: 3exe
PDB Description: Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
UniProt: P11177
Hsap BLAST neighbor: P11177
Species: Homo sapiens

Structure of domain e3exeD2

Domains in the same chain:

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e3exeD2 D:1-191 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeD1 D:192-329 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Domains in the same PDB:

e3exeA1 A:-1-361 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeB2 B:1-191 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeB1 B:192-329 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3exeC1 C:0-361 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeD2 D:1-191 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeD1 D:192-329 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3exeE1 E:1-361 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeF2 F:1-191 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeF1 F:192-329 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3exeG1 G:0-361 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeH2 H:1-191 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3exeH1 H:192-329 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Structural contacts of domain e3exeD2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3exeB1 D:x,y,z->B:X,Y,Z TK C-terminal domain-like Interaction Interface Pymol
e3exeB2 D:x,y,z->B:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3exeA1 D:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3exeC1 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3exeH2 D:X,Y,Z->H:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3exeE1 D:-X+1,Y-1/2,-Z->E:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol