ECOD: domain e3f42A1

Domain ID e3f42A1

A: a+b two layers
X: Ribonuclease PH domain 2-like
H: YbaB
T: YbaB
F: YbaB_DNA_bd

UID:	000169509
Type:	Automatic domain
Parent:	e1j8bA1
Range:	A:0-92
Ligands:	EDO
PDB:	3f42
PDB Description:	PROTEIN HP0035
UniProt:	O24876
Species:	Helicobacter pylori

Structural contacts of domain e3f42A1 of H-group "YbaB":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3f42B1	A:X,Y,Z->B:x,y,z	YbaB	Interaction Interface Pymol
e3f42A1	A:x,y,z->A:X,-Y+1,-Z	YbaB	Interaction Interface Pymol
e3f42A1	A:X,-Y+1,-Z->A:x,y,z	YbaB	Interaction Interface Pymol
e3f42B1	A:X,-Y+1,-Z->B:x,y,z	YbaB	Interaction Interface Pymol
e3f42B1	A:-X,Y,-Z+1/2->B:x,y,z	YbaB	Interaction Interface Pymol
e3f42A1	A:x,y,z->A:-X+1/2,-Y+1/2,Z-1/2	YbaB	Interaction Interface Pymol
e3f42A1	A:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z	YbaB	Interaction Interface Pymol
e3f42A1	A:x,y,z->A:-X,Y,-Z+1/2	YbaB	Interaction Interface Pymol
e3f42A1	A:-X,Y,-Z+1/2->A:x,y,z	YbaB	Interaction Interface Pymol
e3f42B1	A:-X+1/2,-Y+1/2,Z-1/2->B:x,y,z	YbaB	Interaction Interface Pymol
e3f42A1	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2	YbaB	Interaction Interface Pymol
e3f42A1	A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z	YbaB	Interaction Interface Pymol

e3f42A1	A:0-92	Ribonuclease PH domain 2-like	YbaB	YbaB
e3f42B1	B:8-91	Ribonuclease PH domain 2-like	YbaB	YbaB