Domain ID e3fgdA1

Download files:
  • A: mixed a+b and a/b
  • X: Zincin-like
  • H: Metalloproteases ("zincins") catalytic domain
  • T: Metalloproteases ("zincins") catalytic domain
  • F: Peptidase_M4,Peptidase_M4_C
UID: 000379165
Type: Automatic domain
Parent: e1u4gA1
Range: A:1-316
Ligands: BYA CA DMS GOL ZN
PDB: 3fgd
PDB Description: Thermolysin
UniProt: P00800
Species: Bacillus thermoproteolyticus

Structure of domain e3fgdA1

Structural contacts of domain e3fgdA1 of H-group "Metalloproteases ("zincins") catalytic domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3fgdA1 A:x,y,z->A:X,X-Y+1,-Z+1/6 Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:X,X-Y+1,-Z+1/6->A:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:x,y,z->A:X-Y,-Y+1,-Z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:X-Y,-Y+1,-Z->A:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:x,y,z->A:X-Y,X,Z+1/6 Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:X-Y,X,Z+1/6->A:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:x,y,z->A:-Y,-X,-Z-1/6 Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:-Y,-X,-Z-1/6->A:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:x,y,z->A:Y,X,-Z+1/3 Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:Y,X,-Z+1/3->A:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:x,y,z->A:-X,-X+Y,-Z-1/3 Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e3fgdA1 A:-X,-X+Y,-Z-1/3->A:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol