Domain ID e3fn9D4

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 001208987
Type: Automatic domain
Parent: e1jz8A5
Range: D:294-611
Ligands: CL
PDB: 3fn9
PDB Description: Putative beta-galactosidase
UniProt: Q5LJ68
Hsap BLAST neighbor: P08236
Species:

Structure of domain e3fn9D4

Domains in the same chain:

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e3fn9D5 D:22-181 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3fn9D6 D:182-299 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9D4 D:294-611 TIM beta/alpha-barrel TIM barrels TIM barrels
e3fn9D7 D:612-687 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3fn9A5 A:22-181 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3fn9A6 A:181-299 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9A3 A:294-611 TIM beta/alpha-barrel TIM barrels TIM barrels
e3fn9A7 A:612-693 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9B5 B:22-181 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3fn9B6 B:181-299 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9B4 B:294-611 TIM beta/alpha-barrel TIM barrels TIM barrels
e3fn9B7 B:612-693 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9C5 C:22-181 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3fn9C6 C:181-299 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9C4 C:294-611 TIM beta/alpha-barrel TIM barrels TIM barrels
e3fn9C7 C:612-694 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9D5 D:22-181 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3fn9D6 D:182-299 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3fn9D4 D:294-611 TIM beta/alpha-barrel TIM barrels TIM barrels
e3fn9D7 D:612-687 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3fn9D4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3fn9C4 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e3fn9C6 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3fn9C5 D:x,y,z->C:X,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e3fn9C7 D:X-1,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3fn9A7 D:x,y,z->A:-X+1/2,-Y+1,Z-1/2 Immunoglobulin-related Interaction Interface Pymol