Domain ID e3fubA3

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  • A: alpha superhelices
  • X: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like
  • H: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA
  • T: GDNF receptor
  • F: GDNF
UID: 001246907
Type: Automatic domain
Parent: e1q8dA1
Range: A:237-348
Ligands: EDO
PDB: 3fub
PDB Description: GDNF family receptor alpha-1
UniProt: Q62997
Hsap BLAST neighbor: P56159
Species: Rattus norvegicus

Structure of domain e3fubA3

Domains in the same chain:

e3fubA4 A:150-236 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA GDNF receptor
e3fubA3 A:237-348 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA GDNF receptor

Domains in the same PDB:

e3fubA4 A:150-236 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA GDNF receptor
e3fubA3 A:237-348 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA GDNF receptor
e3fubB1 B:40-134 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e3fubC4 C:150-236 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA GDNF receptor
e3fubC3 C:237-348 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA GDNF receptor
e3fubD1 D:32-134 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines

Structural contacts of domain e3fubA3 of H-group "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3fubC3 A:X,Y,Z->C:x,y,z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol
e3fubC4 A:X,Y,Z->C:x,y,z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol
e3fubC3 A:x,y,z->C:X-1/2,Y+1/2,Z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol
e3fubA4 A:x,y,z->A:X-1,Y,Z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol
e3fubA3 A:x,y,z->A:X-1,Y,Z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol
e3fubA3 A:X-1,Y,Z->A:x,y,z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol
e3fubB1 A:x,y,z->B:X-1/2,Y+1/2,Z Cystine-knot cytokines Interaction Interface Pymol
e3fubB1 A:-X+1/2,Y-1/2,-Z->B:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3fubA4 A:x,y,z->A:X-1/2,Y+1/2,Z Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA Interaction Interface Pymol