ECOD: domain e3fydA1

Domain ID e3fydA1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: S-adenosyl-L-methionine-dependent methyltransferases
F: RrnaAD

UID:	001514929
Type:	Automatic domain
Parent:	e1zq9A3
Range:	A:10-187
Ligands:	SO4
PDB:	3fyd
PDB Description:	Probable dimethyladenosine transferase
UniProt:	Q58435
Hsap BLAST neighbor:	Q9UNQ2
Species:	Methanocaldococcus jannaschii

Domains in the same chain:

Download Pymol

e3fydA1	A:10-187	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e3fydA2	A:188-272	HhH/H2TH	H2TH	H2TH

Domains in the same PDB:

e3fydA1	A:10-187	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e3fydA2	A:188-272	HhH/H2TH	H2TH	H2TH

Structural contacts of domain e3fydA1 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3fydA1	A:x,y,z->A:X-1,Y,Z	Rossmann-related	Interaction Interface Pymol
e3fydA2	A:x,y,z->A:X-1,Y,Z	H2TH	Interaction Interface Pymol
e3fydA1	A:X-1,Y,Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3fydA1	A:x,y,z->A:-X+2,Y-1/2,-Z+1	Rossmann-related	Interaction Interface Pymol
e3fydA2	A:x,y,z->A:-X+2,Y-1/2,-Z+1	H2TH	Interaction Interface Pymol
e3fydA1	A:-X+2,Y-1/2,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3fydA2	A:x,y,z->A:X-1,Y,Z-1	H2TH	Interaction Interface Pymol
e3fydA1	A:x,y,z->A:-X+1,Y-1/2,-Z+1	Rossmann-related	Interaction Interface Pymol
e3fydA1	A:-X+1,Y-1/2,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol