ECOD: domain e3gd4B2

Domain ID e3gd4B2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: FAD/NAD(P)-binding domain
F: Pyr_redox_2

UID:	001758282
Type:	Automatic domain
Parent:	e4gavB2
Range:	B:129-260,B:398-474
Ligands:	FAD NAD
PDB:	3gd4
PDB Description:	APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
UniProt:	Q9Z0X1
Hsap BLAST neighbor:	O95831
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e3gd4B2

Domains in the same chain:

Download Pymol

e3gd4B2	B:129-260,B:398-474	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3gd4B1	B:261-397	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3gd4B3	B:475-509,B:557-610	FAD-linked reductases, C-terminal domain-like	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain

Domains in the same PDB:

e3gd4A4	A:128-260,A:398-474	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3gd4A2	A:261-397	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3gd4A5	A:475-510,A:536-610	FAD-linked reductases, C-terminal domain-like	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain
e3gd4B2	B:129-260,B:398-474	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3gd4B1	B:261-397	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3gd4B3	B:475-509,B:557-610	FAD-linked reductases, C-terminal domain-like	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain

Structural contacts of domain e3gd4B2 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gd4A4	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e3gd4B2	B:x,y,z->B:X-1/2,-Y+1/2,-Z-1	Rossmann-related	Interaction Interface Pymol
e3gd4B2	B:X-1/2,-Y+1/2,-Z-1->B:x,y,z	Rossmann-related	Interaction Interface Pymol