Domain ID e3gdkB1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: OMPdecase
UID: 000366171
Type: Automatic domain
Parent: e1km4A1
Range: B:3-262
PDB: 3gdk
PDB Description: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
UniProt: P03962
Hsap BLAST neighbor: P11172
Species: Saccharomyces cerevisiae

Structure of domain e3gdkB1

Structural contacts of domain e3gdkB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gdkC1 B:-X+1/2,-Y+1,Z-1/2->C:x,y,z TIM barrels Interaction Interface Pymol
e3gdkD1 B:x,y,z->D:X-1/2,-Y+1/2,-Z+1 TIM barrels Interaction Interface Pymol
e3gdkA1 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 TIM barrels Interaction Interface Pymol
e3gdkD1 B:-X+1,Y-1/2,-Z+1/2->D:x,y,z TIM barrels Interaction Interface Pymol
e3gdkC1 B:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e3gdkA1 B:-X+1/2,-Y+1,Z-1/2->A:x,y,z TIM barrels Interaction Interface Pymol
e3gdkA1 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z TIM barrels Interaction Interface Pymol
e3gdkA1 B:-X+3/2,-Y+1,Z-1/2->A:x,y,z TIM barrels Interaction Interface Pymol