Domain ID e3gdlB1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: OMPdecase
UID: 000366175
Type: Automatic domain
Parent: e1km4A1
Range: B:5-261
Ligands: UP6
PDB: 3gdl
PDB Description: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
UniProt: P03962
Hsap BLAST neighbor: P11172
Species: Saccharomyces cerevisiae

Structure of domain e3gdlB1

Structural contacts of domain e3gdlB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gdlA1 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e3gdlB1 B:x,y,z->B:-X+1/2,Y-1/2,-Z TIM barrels Interaction Interface Pymol
e3gdlB1 B:-X+1/2,Y-1/2,-Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3gdlA1 B:x,y,z->A:-X,Y,-Z TIM barrels Interaction Interface Pymol