| UID: | 001173658 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1qy6A1 |
| Range: | B:37-261 |
| PDB: | 3gdu |
| PDB Description: | DegS protease |
| UniProt: | P0AEE3 |
| Hsap BLAST neighbor: | Q92743 |
| Species: |
Structure of domain e3gduB4
Domains in the same chain:
| e3gduB4 | B:37-261 | cradle loop barrel | RIFT-related | FMN-binding split barrel 2 |
| e3gduB3 | B:281-354 | PDZ domain | PDZ domain | PDZ domain |
Domains in the same PDB:
| e3gduA3 | A:38-237 | cradle loop barrel | RIFT-related | FMN-binding split barrel |
| e3gduA4 | A:238-353 | PDZ domain | PDZ domain | PDZ domain |
| e3gduB4 | B:37-261 | cradle loop barrel | RIFT-related | FMN-binding split barrel 2 |
| e3gduB3 | B:281-354 | PDZ domain | PDZ domain | PDZ domain |
| e3gduC3 | C:42-237 | cradle loop barrel | RIFT-related | FMN-binding split barrel |
| e3gduC4 | C:238-354 | PDZ domain | PDZ domain | PDZ domain |
Structural contacts of domain e3gduB4 of H-group "RIFT-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gduC3 | B:X,Y,Z->C:x,y,z | RIFT-related | Interaction Interface Pymol |
| e3gduA3 | B:x,y,z->A:X,Y,Z | RIFT-related | Interaction Interface Pymol |
| e3gduB4 | B:x,y,z->B:-X,Y,-Z-1/2 | RIFT-related | Interaction Interface Pymol |
| e3gduB4 | B:-X,Y,-Z-1/2->B:x,y,z | RIFT-related | Interaction Interface Pymol |
| e3gduC4 | B:X,-Y+1,-Z->C:x,y,z | PDZ domain | Interaction Interface Pymol |
| e3gduB4 | B:x,y,z->B:X,-Y+1,-Z | RIFT-related | Interaction Interface Pymol |
| e3gduB4 | B:X,-Y+1,-Z->B:x,y,z | RIFT-related | Interaction Interface Pymol |
| e3gduC4 | B:x,y,z->C:-X,-Y+1,Z-1/2 | PDZ domain | Interaction Interface Pymol |
