Domain ID e3gdxA3

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 000362508
Type: Automatic domain
Parent: e2fmpA3
Range: A:149-335
Ligands: 4BD CL MG
PDB: 3gdx
PDB Description: DNA POLYMERASE BETA
UniProt: P06746
Hsap BLAST neighbor: P06746
Species: Homo sapiens

Structure of domain e3gdxA3

Structural contacts of domain e3gdxA3 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gdxA2 A:x,y,z->A:X-1,Y,Z SAM/DNA-glycosylase Interaction Interface Pymol
e3gdxA1 A:x,y,z->A:X-1,Y,Z SAM/DNA-glycosylase Interaction Interface Pymol
e3gdxA3 A:x,y,z->A:X,Y,Z-1 Nucleotidyltransferase Interaction Interface Pymol
e3gdxA3 A:X,Y,Z-1->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e3gdxA2 A:-X,Y-1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3gdxA2 A:-X+1,Y-1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol