ECOD: domain e3geiA8

Domain ID e3geiA8

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: MMR_HSR1

UID:	001167763
Type:	Automatic domain
Parent:	e2gj8A1
Range:	A:230-284,A:305-389
Ligands:	GCP MG
PDB:	3gei
PDB Description:	TRNA MODIFICATION GTPASE MNME
UniProt:	Q8KAS1
Species:	Chlorobaculum tepidum

Domain
In chain context
In PDB context

Structure of domain e3geiA8

Domains in the same chain:

Download Pymol

e3geiA7	A:4-134	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3geiA9	A:135-230,A:387-473	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e3geiA8	A:230-284,A:305-389	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e3geiA7	A:4-134	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3geiA9	A:135-230,A:387-473	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e3geiA8	A:230-284,A:305-389	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3geiB13	B:4-134	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3geiB15	B:135-230,B:387-473	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e3geiB14	B:230-284,B:305-389	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3geiC2	C:4-134	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3geiC1	C:135-230,C:403-473	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain

Structural contacts of domain e3geiA8 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3geiB14	A:X-1/2,Y-1/2,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3geiA8	A:x,y,z->A:X,-Y,-Z	P-loop domains-related	Interaction Interface Pymol
e3geiA8	A:X,-Y,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol