| UID: | 000134032 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1lb2B1 |
| Range: | B:236-311 |
| PDB: | 3gfk |
| PDB Description: | DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA |
| UniProt: | P20429 |
| Species: | Bacillus subtilis |
Structure of domain e3gfkB1
Domains in the same chain:
| e3gfkB1 | B:236-311 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Domains in the same PDB:
| e3gfkA1 | A:1-118 | Thioredoxin-like | Thioredoxin-like | Thioredoxin-like |
| e3gfkB1 | B:236-311 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Structural contacts of domain e3gfkB1 of H-group "SAM/DNA-glycosylase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gfkA1 | B:x,y,z->A:X,Y,Z | Thioredoxin-like | Interaction Interface Pymol |
| e3gfkA1 | B:X-1/2,-Y+1/2,-Z->A:x,y,z | Thioredoxin-like | Interaction Interface Pymol |
| e3gfkA1 | B:X,Y-1,Z->A:x,y,z | Thioredoxin-like | Interaction Interface Pymol |
| e3gfkA1 | B:X-1,Y,Z->A:x,y,z | Thioredoxin-like | Interaction Interface Pymol |
| e3gfkA1 | B:X-1/2,-Y-1/2,-Z->A:x,y,z | Thioredoxin-like | Interaction Interface Pymol |
| e3gfkB1 | B:x,y,z->B:X-1/2,-Y+1/2,-Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e3gfkB1 | B:X-1/2,-Y+1/2,-Z->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
