Domain ID e3gg2B2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: UDPG_MGDP_dh_N
UID: 001040173
Type: Automatic domain
Parent: e1dljA2
Range: B:79-280
Ligands: UGA
PDB: 3gg2
PDB Description: Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family
UniProt: Q7MVC7
Hsap BLAST neighbor: O60701
Species: Porphyromonas gingivalis

Structure of domain e3gg2B2

Domains in the same chain:

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e3gg2B2 B:79-280 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3gg2B1 B:282-381 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3gg2B3 B:384-512 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Domains in the same PDB:

e3gg2A2 A:78-279 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3gg2A1 A:280-382 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3gg2A3 A:380-512 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3gg2B2 B:79-280 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3gg2B1 B:282-381 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3gg2B3 B:384-512 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3gg2C2 C:79-280 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3gg2C1 C:282-381 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3gg2C3 C:380-512 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3gg2D2 D:79-279 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3gg2D1 D:280-382 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3gg2D3 D:380-512 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Structural contacts of domain e3gg2B2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gg2A1 B:x,y,z->A:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e3gg2C3 B:X,Y,Z->C:x,y,z Rossmann-related Interaction Interface Pymol
e3gg2D3 B:x,y,z->D:X,Y,Z-1 Rossmann-related Interaction Interface Pymol
e3gg2D2 B:x,y,z->D:X,Y,Z-1 Rossmann-related Interaction Interface Pymol
e3gg2A2 B:-X+2,Y-1/2,-Z+2->A:x,y,z Rossmann-related Interaction Interface Pymol