ECOD: domain e3gimA6

Domain ID e3gimA6

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: IMS_HHH

UID:	001256041
Type:	Automatic domain
Parent:	e1jx4A1
Range:	A:178-240
Ligands:	CA
PDB:	3gim
PDB Description:	DNA polymerase IV
UniProt:	Q97W02
Species:

Domain
In chain context
In PDB context

Structure of domain e3gimA6

Domains in the same chain:

Download Pymol

e3gimA5	A:1-21,A:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3gimA7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3gimA6	A:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3gimA2	A:241-341	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3gimA5	A:1-21,A:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3gimA7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3gimA6	A:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3gimA2	A:241-341	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3gimA6 of H-group "SAM/DNA-glycosylase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gimA5	A:x,y,z->A:X-1/2,-Y+1/2,-Z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol