ECOD: domain e3gk0A1

Domain ID e3gk0A1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: PdxJ

UID:	000134086
Type:	Automatic domain
Parent:	e1m5wA1
Range:	A:3-254
Ligands:	DXP PO4
PDB:	3gk0
PDB Description:	Pyridoxine 5'-phosphate synthase
UniProt:	Q3JQ80
Species:

Domains in the same chain:

Download Pymol

e3gk0A1	A:3-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e3gk0A1	A:3-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0B1	B:3-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0C1	C:10-253	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0D1	D:9-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0E1	E:10-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0F1	F:10-253	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0G1	G:10-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3gk0H1	H:9-254	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e3gk0A1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gk0G1	A:X,Y,Z->G:x,y,z	TIM barrels	Interaction Interface Pymol
e3gk0D1	A:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol
e3gk0F1	A:x,y,z->F:X,Y-1,Z-1	TIM barrels	Interaction Interface Pymol
e3gk0C1	A:X,Y-1,Z->C:x,y,z	TIM barrels	Interaction Interface Pymol
e3gk0E1	A:X,Y,Z->E:x,y,z	TIM barrels	Interaction Interface Pymol
e3gk0H1	A:X,Y-1,Z->H:x,y,z	TIM barrels	Interaction Interface Pymol