Domain ID e3glhJ7

Download files:
  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: DNA_pol3_delta2
UID: 001793421
Type: Automatic domain
Parent: e1a5tA5
Range: J:1-165
PDB: 3glh
PDB Description: DNA polymerase III subunit delta'
UniProt: P28631
Species:

Structure of domain e3glhJ7

Domains in the same chain:

Download Pymol

e3glhJ7 J:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhJ5 J:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3glhJ1 J:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Domains in the same PDB:

e3glhA3 A:1-140 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhA2 A:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e3glhA1 A:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhB2 B:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhB5 B:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhB4 B:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhC3 C:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhC5 C:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhC4 C:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhD2 D:4-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhD5 D:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhD4 D:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhE4 E:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhE2 E:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3glhE3 E:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhF3 F:1-140 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhF2 F:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e3glhF1 F:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhG2 G:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhG5 G:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhG4 G:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhH2 H:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhH5 H:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhH4 H:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhI3 I:4-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhI5 I:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhI4 I:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhJ7 J:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhJ5 J:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3glhJ1 J:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhK3 K:1-140 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhK2 K:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e3glhK1 K:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhL3 L:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhL5 L:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhL4 L:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhM1 M:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhM5 M:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhM4 M:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhN3 N:4-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhN5 N:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3glhN4 N:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3glhO4 O:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3glhO1 O:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3glhO2 O:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Structural contacts of domain e3glhJ7 of H-group "P-loop domains-related":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1a5tA5 J:x,y,z->I:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3glhI4 J:x,y,z->I:X,Y,Z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol
e3glhI5 J:x,y,z->I:X,Y,Z Histone-related Interaction Interface Pymol
e3glhI5 J:-X+1,Y-1/2,-Z+1->B:x,y,z Histone-related Interaction Interface Pymol
e3glhB5 J:-X+1,Y-1/2,-Z+1->B:x,y,z Histone-related Interaction Interface Pymol
e3glhK2 J:-X+2,Y-1/2,-Z+1->K:x,y,z Histone-related Interaction Interface Pymol
e3glhK1 J:-X+2,Y-1/2,-Z+1->K:x,y,z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol
e3glhL4 J:-X+2,Y-1/2,-Z+1->L:x,y,z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol