ECOD: domain e3gmnA1

Domain ID e3gmnA1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: C1-set

UID:	000376744
Type:	Automatic domain
Parent:	e1k5nB1
Range:	A:183-281
Ligands:	EDO
PDB:	3gmn
PDB Description:	T-cell surface glycoprotein CD1d1
UniProt:	P11609
Hsap BLAST neighbor:	P15812
Species:	Mus musculus

Domains in the same chain:

Download Pymol

e3gmnA2	A:7-182	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e3gmnA1	A:183-281	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3gmnA2	A:7-182	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e3gmnA1	A:183-281	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3gmnB1	B:1-99	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3gmnA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gmnB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3gmnA2	A:x,y,z->A:-X,Y-1/2,-Z	MHC antigen-recognition domain	Interaction Interface Pymol
e3gmnA2	A:x,y,z->A:X-1,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e3gmnA2	A:x,y,z->A:-X-1,Y-1/2,-Z	MHC antigen-recognition domain	Interaction Interface Pymol