ECOD: domain e3gmqA2

Domain ID e3gmqA2

A: a+b two layers
X: MHC antigen-recognition domain
H: MHC antigen-recognition domain
T: MHC antigen-recognition domain
F: MHC_I_3

UID:	000376754
Type:	Automatic domain
Parent:	e1lqvA1
Range:	A:7-182
Ligands:	EDO NAG PLM
PDB:	3gmq
PDB Description:	T-cell surface glycoprotein CD1d1
UniProt:	P11609
Hsap BLAST neighbor:	P15813
Species:	Mus musculus

Domains in the same chain:

Download Pymol

e3gmqA2	A:7-182	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e3gmqA1	A:183-281	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3gmqA2	A:7-182	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e3gmqA1	A:183-281	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3gmqB1	B:1-99	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3gmqA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gmqB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3gmqB1	A:X-1,Y,Z-1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3gmqA2	A:x,y,z->A:X-1,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e3gmqA2	A:X-1,Y,Z->A:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e3gmqA1	A:X-1,Y,Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3gmqA1	A:-X,Y-1/2,-Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3gmqA1	A:-X-1,Y-1/2,-Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3gmqB1	A:X-1,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol