| UID: | 000369458 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3bbbA1 |
| Range: | A:-1-130 |
| Ligands: | CDP MG PO4 |
| PDB: | 3gpa |
| PDB Description: | Nucleoside diphosphate kinase |
| UniProt: | Q5UQL3 |
| Hsap BLAST neighbor: | Q13232 |
| Species: | Acanthamoeba polyphaga mimivirus |
Structure of domain e3gpaA1
Domains in the same chain:
| e3gpaA1 | A:-1-130 | Alpha-beta plaits | Nucleoside diphosphate kinases | Nucleoside diphosphate kinases |
Domains in the same PDB:
Structural contacts of domain e3gpaA1 of H-group "Nucleoside diphosphate kinases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gpaC1 | A:X,-Y,-Z->C:x,y,z | Nucleoside diphosphate kinases | Interaction Interface Pymol |
| e3gpaE1 | A:X,Y,Z->E:x,y,z | Nucleoside diphosphate kinases | Interaction Interface Pymol |
| e3gpaC1 | A:X,Y,Z->C:x,y,z | Nucleoside diphosphate kinases | Interaction Interface Pymol |
| e3gpaB1 | A:x,y,z->B:-X+1/2,Y-1/2,-Z+1/2 | Nucleoside diphosphate kinases | Interaction Interface Pymol |
| e3gpaD1 | A:-X+1,Y,-Z+1/2->D:x,y,z | Nucleoside diphosphate kinases | Interaction Interface Pymol |
