Domain ID e3gpmA1

Download files:
  • A: a+b two layers
  • X: DNA clamp
  • H: DNA clamp
  • T: DNA clamp
  • F: PCNA_N
UID: 000365702
Type: Automatic domain
Parent: e1plqA1
Range: A:1-126
PDB: 3gpm
PDB Description: Proliferating cell nuclear antigen
UniProt: P15873
Hsap BLAST neighbor: P12004
Species: Saccharomyces cerevisiae

Structure of domain e3gpmA1

Domains in the same chain:

e3gpmA1 A:1-126 DNA clamp DNA clamp DNA clamp
e3gpmA2 A:127-254 DNA clamp DNA clamp DNA clamp

Domains in the same PDB:

e3gpmA1 A:1-126 DNA clamp DNA clamp DNA clamp
e3gpmA2 A:127-254 DNA clamp DNA clamp DNA clamp

Structural contacts of domain e3gpmA1 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gpmA2 A:x,y,z->A:Z,X,Y DNA clamp Interaction Interface Pymol
e3gpmA1 A:x,y,z->A:Z,X,Y DNA clamp Interaction Interface Pymol
e3gpmA1 A:Z,X,Y->A:x,y,z DNA clamp Interaction Interface Pymol
e3gpmA2 A:x,y,z->A:-Z,X+1/2,-Y+1/2 DNA clamp Interaction Interface Pymol