ECOD: domain e3gprB1

Domain ID e3gprB1

A: a+b complex topology
X: C-type lectin-like
H: C-type lectin-like
T: C-type lectin-like
F: Lectin_C

UID:	000137481
Type:	Automatic domain
Parent:	e1qddA1
Range:	B:2002-2128
PDB:	3gpr
PDB Description:	RHODOCETIN SUBUNIT BETA
UniProt:	P81398
Hsap BLAST neighbor:	P16112
Species:	Calloselasma rhodostoma

Domains in the same chain:

Download Pymol

e3gprB1	B:2002-2128	C-type lectin-like	C-type lectin-like	C-type lectin-like

Domains in the same PDB:

e3gprA1	A:1001-1132	C-type lectin-like	C-type lectin-like	C-type lectin-like
e3gprB1	B:2002-2128	C-type lectin-like	C-type lectin-like	C-type lectin-like
e3gprC1	C:3002-3135	C-type lectin-like	C-type lectin-like	C-type lectin-like
e3gprD1	D:4001-4124	C-type lectin-like	C-type lectin-like	C-type lectin-like

Structural contacts of domain e3gprB1 of H-group "C-type lectin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gprA1	B:x,y,z->A:X,Y,Z	C-type lectin-like	Interaction Interface Pymol
e3gprD1	B:X-Y,X-1,Z-1/6->D:x,y,z	C-type lectin-like	Interaction Interface Pymol
e3gprC1	B:X-Y,X,Z-1/6->C:x,y,z	C-type lectin-like	Interaction Interface Pymol
e3gprD1	B:X-Y,X,Z-1/6->D:x,y,z	C-type lectin-like	Interaction Interface Pymol
e3gprD1	B:X,Y,Z->D:x,y,z	C-type lectin-like	Interaction Interface Pymol
e3gprC1	B:X,Y,Z->C:x,y,z	C-type lectin-like	Interaction Interface Pymol
e3gprB1	B:x,y,z->B:X-Y,X-1,Z-1/6	C-type lectin-like	Interaction Interface Pymol
e3gprB1	B:X-Y,X-1,Z-1/6->B:x,y,z	C-type lectin-like	Interaction Interface Pymol
e3gprA1	B:X-Y,X-1,Z-1/6->A:x,y,z	C-type lectin-like	Interaction Interface Pymol