Domain ID e3gq7A1

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  • A: beta duplicates or obligate multimers
  • X: Single-stranded right-handed beta-helix
  • H: Pectin lyase-like
  • T: Pectin lyase-like
  • F: Pectate_lyase_3
UID: 000364252
Type: Automatic domain
Parent: e3eqnA2
Range: A:87-551
Ligands: CA CO3 MG PO4
PDB: 3gq7
PDB Description: Preneck appendage protein
UniProt: P20345
Species: Bacillus phage phi29

Structure of domain e3gq7A1

Structural contacts of domain e3gq7A1 of H-group "Pectin lyase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gq7A1 A:x,y,z->A:-Y+1,X-Y,Z Pectin lyase-like Interaction Interface Pymol
e3gq7A1 A:-Y+1,X-Y,Z->A:x,y,z Pectin lyase-like Interaction Interface Pymol
e3gq7A2 A:-Y+1,X-Y,Z->A:x,y,z Adhesin YadA, collagen-binding domain Interaction Interface Pymol
e3gq7A2 A:-X+1,-X+Y,-Z+1->A:x,y,z Adhesin YadA, collagen-binding domain Interaction Interface Pymol
e3gq7A2 A:x,y,z->A:Y,X,-Z+1 Adhesin YadA, collagen-binding domain Interaction Interface Pymol
e3gq7A2 A:Y,X,-Z+1->A:x,y,z Adhesin YadA, collagen-binding domain Interaction Interface Pymol
e3gq7A1 A:x,y,z->A:X-Y+1/3,-Y+2/3,-Z+2/3 Pectin lyase-like Interaction Interface Pymol
e3gq7A1 A:X-Y+1/3,-Y+2/3,-Z+2/3->A:x,y,z Pectin lyase-like Interaction Interface Pymol
e3gq7A2 A:x,y,z->A:X-Y,-Y+1,-Z+1 Adhesin YadA, collagen-binding domain Interaction Interface Pymol
e3gq7A1 A:x,y,z->A:-X+4/3,-X+Y+2/3,-Z+2/3 Pectin lyase-like Interaction Interface Pymol
e3gq7A1 A:-X+4/3,-X+Y+2/3,-Z+2/3->A:x,y,z Pectin lyase-like Interaction Interface Pymol