| UID: | 000364254 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3eqnA2 |
| Range: | A:88-551 |
| Ligands: | CA CO3 MG NHE |
| PDB: | 3gq8 |
| PDB Description: | Preneck appendage protein |
| UniProt: | P20345 |
| Species: | Bacillus phage phi29 |
Structure of domain e3gq8A1
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3gq8A1 of H-group "Pectin lyase-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gq8A1 | A:x,y,z->A:-Y+1,X-Y,Z | Pectin lyase-like | Interaction Interface Pymol |
| e3gq8A2 | A:-Y+1,X-Y,Z->A:x,y,z | Adhesin YadA, collagen-binding domain | Interaction Interface Pymol |
| e3gq8A1 | A:-Y+1,X-Y,Z->A:x,y,z | Pectin lyase-like | Interaction Interface Pymol |
| e3gq8A2 | A:-X+1,-X+Y,-Z+1->A:x,y,z | Adhesin YadA, collagen-binding domain | Interaction Interface Pymol |
| e3gq8A2 | A:x,y,z->A:Y,X,-Z+1 | Adhesin YadA, collagen-binding domain | Interaction Interface Pymol |
| e3gq8A2 | A:Y,X,-Z+1->A:x,y,z | Adhesin YadA, collagen-binding domain | Interaction Interface Pymol |
| e3gq8A1 | A:x,y,z->A:X-Y+1/3,-Y+2/3,-Z+2/3 | Pectin lyase-like | Interaction Interface Pymol |
| e3gq8A1 | A:X-Y+1/3,-Y+2/3,-Z+2/3->A:x,y,z | Pectin lyase-like | Interaction Interface Pymol |
| e3gq8A2 | A:x,y,z->A:X-Y,-Y+1,-Z+1 | Adhesin YadA, collagen-binding domain | Interaction Interface Pymol |
| e3gq8A1 | A:x,y,z->A:-X+4/3,-X+Y+2/3,-Z+2/3 | Pectin lyase-like | Interaction Interface Pymol |
| e3gq8A1 | A:-X+4/3,-X+Y+2/3,-Z+2/3->A:x,y,z | Pectin lyase-like | Interaction Interface Pymol |
