| UID: | 000364263 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3gqhA1 |
| Range: | A:692-854 |
| Ligands: | ATP MG |
| PDB: | 3gqk |
| PDB Description: | Preneck appendage protein |
| UniProt: | P20345 |
| Species: | Bacillus phage phi29 |
Structure of domain e3gqkA1
Domains in the same chain:
| e3gqkA1 | A:692-854 | beta-clip | Head decoration protein D (gpD, major capsid protein D) | Head decoration protein D (gpD, major capsid protein D) |
Domains in the same PDB:
| e3gqkA1 | A:692-854 | beta-clip | Head decoration protein D (gpD, major capsid protein D) | Head decoration protein D (gpD, major capsid protein D) |
Structural contacts of domain e3gqkA1 of H-group "Head decoration protein D (gpD, major capsid protein D)":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gqkA1 | A:x,y,z->A:Z,X,Y | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:Z,X,Y->A:x,y,z | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:x,y,z->A:Z-1/2,-X-1/2,-Y | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:Z-1/2,-X-1/2,-Y->A:x,y,z | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:X-1/2,-Y+1/2,-Z->A:x,y,z | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:x,y,z->A:-Z,X-1/2,-Y+1/2 | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:-Z,X-1/2,-Y+1/2->A:x,y,z | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:x,y,z->A:-Z,X+1/2,-Y+1/2 | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
| e3gqkA1 | A:-Z,X+1/2,-Y+1/2->A:x,y,z | Head decoration protein D (gpD, major capsid protein D) | Interaction Interface Pymol |
