ECOD: domain e3gr9D2

Domain ID e3gr9D2

A: a/b three-layered sandwiches
X: PLP-dependent transferases
H: PLP-dependent transferases
T: PLP-dependent transferases
F: DegT_DnrJ_EryC1

UID:	001569584
Type:	Automatic domain
Parent:	e1mdoA2
Range:	D:8-266
PDB:	3gr9
PDB Description:	ColD
UniProt:	B1B4V9
Species:	Escherichia coli

Domains in the same chain:

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e3gr9D2	D:8-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9D1	D:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e3gr9A2	A:5-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9A1	A:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9B1	B:4-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9B2	B:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9C2	C:1-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9C1	C:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9D2	D:8-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9D1	D:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9E2	E:5-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9E1	E:267-387	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9F2	F:3-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9F1	F:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9G2	G:2-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9G1	G:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e3gr9H1	H:8-266	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e3gr9H2	H:267-388	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e3gr9D2 of H-group "PLP-dependent transferases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gr9C2	D:x,y,z->C:X,Y,Z	PLP-dependent transferases	Interaction Interface Pymol
e3gr9C1	D:x,y,z->C:X,Y,Z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e3gr9B2	D:X-1,Y,Z+1->B:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e3gr9B2	D:x,y,z->B:X,Y,Z-1	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e3gr9C2	D:X-1,Y,Z->C:x,y,z	PLP-dependent transferases	Interaction Interface Pymol