ECOD: domain e3gv8B14

Domain ID e3gv8B14

A: a+b two layers
X: Alpha-beta plaits
H: Adenylyl and guanylyl cyclase catalytic domain-like
T: Adenylyl and guanylyl cyclase catalytic domain-like
F: IMS

UID:	001169299
Type:	Automatic domain
Parent:	e1t3nA4
Range:	B:26-48,B:99-234
Ligands:	DGT MG
PDB:	3gv8
PDB Description:	DNA polymerase iota
UniProt:	Q9UNA4
Hsap BLAST neighbor:	Q9UNA4
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3gv8B14	B:26-48,B:99-234	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3gv8B13	B:49-98	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3gv8B15	B:235-299	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3gv8B16	B:300-414	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3gv8B14	B:26-48,B:99-234	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3gv8B13	B:49-98	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3gv8B15	B:235-299	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3gv8B16	B:300-414	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3gv8B14 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3gv8B14	B:x,y,z->B:X-Y,X,Z-1/6	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e3gv8B15	B:x,y,z->B:X-Y,X,Z-1/6	SAM/DNA-glycosylase	Interaction Interface Pymol
e3gv8B14	B:X-Y,X,Z-1/6->B:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e3gv8B14	B:x,y,z->B:-Y,-X,-Z+1/6	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e3gv8B14	B:-Y,-X,-Z+1/6->B:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e3gv8B14	B:x,y,z->B:Y,X,-Z-1/3	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e3gv8B13	B:x,y,z->B:Y,X,-Z-1/3	Hypothetical protein Ta1206-like	Interaction Interface Pymol
e3gv8B13	B:Y,X,-Z-1/3->B:x,y,z	Hypothetical protein Ta1206-like	Interaction Interface Pymol
e3gv8B14	B:Y,X,-Z-1/3->B:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol