Domain ID e3gydB1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: cNMP_binding
UID: 000361534
Type: Automatic domain
Parent: e1o5lA1
Range: B:-11-168
Ligands: CMP GOL
PDB: 3gyd
PDB Description: Cyclic nucleotide-binding domain
UniProt: Q1GZZ4
Species:

Structure of domain e3gydB1

Structural contacts of domain e3gydB1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gydA1 B:x,y,z->A:X,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e3gydB1 B:x,y,z->B:-X,Y-1/2,-Z Double-stranded beta-helix Interaction Interface Pymol
e3gydB1 B:-X,Y-1/2,-Z->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e3gydA1 B:-X+1,Y-1/2,-Z+1->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e3gydA1 B:x,y,z->A:X-1,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e3gydA1 B:x,y,z->A:-X+1,Y-1/2,-Z Double-stranded beta-helix Interaction Interface Pymol
e3gydA1 B:x,y,z->A:-X+1,Y-1/2,-Z+1 Double-stranded beta-helix Interaction Interface Pymol
e3gydB1 B:x,y,z->B:-X+1,Y-1/2,-Z Double-stranded beta-helix Interaction Interface Pymol
e3gydB1 B:-X+1,Y-1/2,-Z->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e3gydB1 B:x,y,z->B:X,Y-1,Z Double-stranded beta-helix Interaction Interface Pymol
e3gydB1 B:X,Y-1,Z->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol