| UID: | 000134478 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1mxiA1 |
| Range: | A:106-268 |
| Ligands: | SAM |
| PDB: | 3gyq |
| PDB Description: | RRNA (ADENOSINE-2'-O-)-METHYLTRANSFERASE |
| UniProt: | P18644 |
| Species: | Streptomyces cyaneus |
Structure of domain e3gyqA2
Domains in the same chain:
| e3gyqA1 | A:8-105 | Bacillus chorismate mutase-like | L30e-like | L30e-like |
| e3gyqA2 | A:106-268 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
Domains in the same PDB:
Structural contacts of domain e3gyqA2 of H-group "alpha/beta knot":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gyqB3 | A:X,Y,Z->B:x,y,z | L30e-like | Interaction Interface Pymol |
| e3gyqB4 | A:X,Y,Z->B:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e3gyqA1 | A:-X+1,Y-1/2,-Z+1/2->A:x,y,z | L30e-like | Interaction Interface Pymol |
| e3gyqB3 | A:x,y,z->B:X-1,Y,Z | L30e-like | Interaction Interface Pymol |
| e3gyqB4 | A:x,y,z->B:X-1,Y,Z | alpha/beta knot | Interaction Interface Pymol |
| e3gyqA1 | A:x,y,z->A:X-1,Y,Z | L30e-like | Interaction Interface Pymol |
| e3gyqA2 | A:x,y,z->A:X-1,Y,Z | alpha/beta knot | Interaction Interface Pymol |
| e3gyqA2 | A:X-1,Y,Z->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e3gyqA1 | A:x,y,z->A:X-1,Y+1,Z | L30e-like | Interaction Interface Pymol |
