Domain ID e3h1jA2

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  • A: a+b two layers
  • X: LuxS, MPP, ThrRS/AlaRS common domain
  • H: LuxS, MPP, ThrRS/AlaRS common domain
  • T: LuxS/MPP-like metallohydrolase
  • F: Peptidase_M16_C
UID: 000362128
Type: Automatic domain
Parent: e1hr6A2
Range: A:234-444
Ligands: PEE
PDB: 3h1j
PDB Description: MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I
Hsap BLAST neighbor: P31930
Species: Gallus gallus

Structure of domain e3h1jA2

Domains in the same chain:

e3h1jA1 A:2-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jA2 A:234-444 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase

Domains in the same PDB:

e3h1jA1 A:2-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jA2 A:234-444 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jB1 B:19-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jB2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jC2 C:1-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e3h1jC1 C:262-380 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jD1 D:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e3h1jD2 D:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e3h1jE2 E:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e3h1jE3 E:67-196 ISP domain ISP domain ISP domain
e3h1jF1 F:10-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jG1 G:1-81 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jH1 H:9-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jI1 I:28-77 Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein
e3h1jJ1 J:4-64 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jN1 N:3-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jN2 N:234-444 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jO1 O:18-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jO2 O:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3h1jP2 P:2-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e3h1jP1 P:262-380 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jQ1 Q:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e3h1jQ2 Q:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e3h1jR2 R:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e3h1jR3 R:67-196 ISP domain ISP domain ISP domain
e3h1jS1 S:10-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jT1 T:1-79 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jU1 U:12-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3h1jW1 W:4-62 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Structural contacts of domain e3h1jA2 of H-group "LuxS, MPP, ThrRS/AlaRS common domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3h1jB2 A:X,Y,Z->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e3h1jB1 A:X,Y,Z->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e3h1jE2 A:x,y,z->E:X,Y,Z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol
e3h1jI1 A:x,y,z->I:X,Y,Z Ubiquinol-cytochrome c reductase 8 kDa protein Interaction Interface Pymol
e3h1jG1 A:X,Y,Z->G:x,y,z Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e3h1jC2 A:x,y,z->C:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3h1jJ1 A:X,Y,Z->J:x,y,z Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e3h1jD2 A:X,Y,Z->D:x,y,z cytochrome c1 transmembrane anchor Interaction Interface Pymol
e3h1jS1 A:X,Y,Z->S:x,y,z 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol