Domain ID e3h5yA2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_1
UID: 000363596
Type: Automatic domain
Parent: e1ra6A2
Range: A:5-378
Ligands: CTP GOL MN
PDB: 3h5y
PDB Description: RNA dependent RNA polymerase
UniProt: Q70ET3
Species: Norwalk virus

Structure of domain e3h5yA2

Structural contacts of domain e3h5yA2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3h5yA1 A:-X+1,Y-1/2,-Z-1/2->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3h5yA2 A:x,y,z->A:-X+1/2,-Y,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3h5yA2 A:-X+1/2,-Y,Z-1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3h5yA1 A:x,y,z->A:X-1/2,-Y-1/2,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3h5yA2 A:x,y,z->A:X-1/2,-Y-1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3h5yA2 A:X-1/2,-Y-1/2,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol