Domain ID e3ho8D5

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  • A: alpha arrays
  • X: RuvA-C
  • H: post-HMGL domain-like
  • T: post-HMGL domain-like
  • F: PYC_OADA
UID: 001124169
Type: Manual and representative domain
Range: D:863-914,D:947-984
PDB: 3ho8
PDB Description: Pyruvate carboxylase
UniProt: Q99UY8
Hsap BLAST neighbor: P11498
Species:

Structure of domain e3ho8D5

Domains in the same chain:

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e3ho8D7 D:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e3ho8D2 D:151-168,D:239-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3ho8D3 D:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3ho8D1 D:491-518,D:1027-1093 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3ho8D4 D:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3ho8D5 D:863-914,D:947-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3ho8D6 D:985-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like

Domains in the same PDB:

e3ho8A11 A:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e3ho8A2 A:151-171,A:237-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3ho8A9 A:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3ho8A12 A:491-518,A:1026-1093 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3ho8A1 A:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3ho8A10 A:863-1025 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3ho8B11 B:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e3ho8B2 B:151-168,B:239-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3ho8B9 B:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3ho8B12 B:491-518,B:1026-1093 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3ho8B1 B:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3ho8B10 B:863-1025 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3ho8C11 C:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e3ho8C2 C:151-171,C:236-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3ho8C10 C:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3ho8C12 C:491-518,C:1027-1093 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3ho8C1 C:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3ho8C9 C:863-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3ho8D7 D:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e3ho8D2 D:151-168,D:239-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3ho8D3 D:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3ho8D1 D:491-518,D:1027-1093 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3ho8D4 D:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3ho8D5 D:863-914,D:947-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3ho8D6 D:985-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like

Structural contacts of domain e3ho8D5 of H-group "post-HMGL domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ho8A1 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e3ho8A10 D:x,y,z->A:X-1,Y,Z post-HMGL domain-like Interaction Interface Pymol