Domain ID e3hpgB1

Download files:
  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Integrase_Zn
UID: 000368728
Type: Automatic domain
Parent: e1k6yA1
Range: B:4-47
Ligands: ZN
PDB: 3hpg
PDB Description: INTEGRASE
UniProt: P35956
Species:

Structure of domain e3hpgB1

Domains in the same chain:

Download Pymol

e3hpgB1 B:4-47 HTH HTH tri-helical
e3hpgB2 B:48-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3hpgA1 A:4-47 HTH HTH tri-helical
e3hpgA2 A:48-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3hpgB1 B:4-47 HTH HTH tri-helical
e3hpgB2 B:48-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3hpgC1 C:4-48 HTH HTH tri-helical
e3hpgC3 C:58-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3hpgD3 D:2-49 HTH HTH tri-helical
e3hpgD4 D:58-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3hpgE3 E:2-49 HTH HTH tri-helical
e3hpgE4 E:58-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3hpgF1 F:2-47 HTH HTH tri-helical
e3hpgF2 F:48-212 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3hpgG1 G:348-423 N-cbl like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
e3hpgH1 H:347-418 N-cbl like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
e3hpgI1 I:348-418 N-cbl like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
e3hpgJ1 J:347-423 N-cbl like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
e3hpgK1 K:347-426 N-cbl like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
e3hpgL2 L:348-413 N-cbl like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70

Structural contacts of domain e3hpgB1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3hpgC3 B:x,y,z->C:X-1,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3hpgH1 B:-X,Y-1/2,-Z+1->H:x,y,z Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Interaction Interface Pymol
e3hpgD4 B:x,y,z->D:X-1,Y,Z Ribonuclease H-like Interaction Interface Pymol