Domain ID e3hu1D3

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  • A: a+b two layers
  • X: Cdc48 domain 2-like
  • H: Cdc48 domain 2-like
  • T: Cdc48 domain 2-like
  • F: CDC48_2
UID: 000393139
Type: Automatic domain
Parent: e1cr5A2
Range: D:107-200
PDB: 3hu1
PDB Description: Transitional endoplasmic reticulum ATPase
UniProt: P55072
Hsap BLAST neighbor: P55072
Species: Homo sapiens

Structure of domain e3hu1D3

Domains in the same chain:

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e3hu1D1 D:12-106 cradle loop barrel RIFT-related double psi
e3hu1D3 D:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1D9 D:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1D10 D:372-462 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e3hu1A4 A:12-106 cradle loop barrel RIFT-related double psi
e3hu1A2 A:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1A9 A:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1A10 A:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e3hu1B1 B:12-106 cradle loop barrel RIFT-related double psi
e3hu1B3 B:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1B9 B:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1B10 B:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e3hu1C1 C:12-106 cradle loop barrel RIFT-related double psi
e3hu1C3 C:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1C9 C:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1C10 C:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e3hu1D1 D:12-106 cradle loop barrel RIFT-related double psi
e3hu1D3 D:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1D9 D:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1D10 D:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e3hu1E1 E:12-106 cradle loop barrel RIFT-related double psi
e3hu1E3 E:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1E9 E:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1E10 E:372-462 Histone-like Histone-related AAA+ ATPase lid domain
e3hu1F1 F:12-106 cradle loop barrel RIFT-related double psi
e3hu1F3 F:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3hu1F9 F:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3hu1F10 F:372-462 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e3hu1D3 of H-group "Cdc48 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3hu1E9 D:X,Y,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e3hu1A4 D:X-1,Y+1,Z->A:x,y,z RIFT-related Interaction Interface Pymol
e3hu1A2 D:X-1,Y+1,Z->A:x,y,z Cdc48 domain 2-like Interaction Interface Pymol
e3hu1B10 D:X-1,Y,Z->B:x,y,z Histone-related Interaction Interface Pymol