Domain ID e3i1nV1

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  • A: beta barrels
  • X: Ribosomal protein L25-like
  • H: Ribosomal protein L25-like
  • T: Ribosomal protein L25-like
  • F: Ribosomal_L25p
UID: 000371394
Type: Automatic domain
Parent: e1dfuP1
Range: V:1-94
PDB: 3i1n
PDB Description:
Species:

Structure of domain e3i1nV1

Domains in the same chain:

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e3i1nV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like

Domains in the same PDB:

e3i1n01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i1n21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3i1n31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3i1n41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3i1nC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3i1nC2 C:125-271 SH3 SH3 SH3
e3i1nE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3i1nF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3i1nG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i1nG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i1nH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3i1nI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3i1nI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3i1nJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3i1nK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3i1nN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3i1nO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3i1nR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3i1nS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3i1nT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3i1nU1 U:1-102 SH3 SH3 SH3
e3i1nV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3i1nW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3i1nX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3i1nY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3i1nZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3i1nV1 of H-group "Ribosomal protein L25-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dfuP1 V:x,y,z->M:X,Y,Z Ribosomal protein L25-like Interaction Interface Pymol
e3i1nS1 V:x,y,z->S:X-1/2,-Y-1/2,-Z Ribosomal protein L22 Interaction Interface Pymol