Domain ID e3i20E1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 000371586
Type: Automatic domain
Parent: e1dmgA1
Range: E:1-201
Ligands: MG
PDB: 3i20
PDB Description:
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e3i20E1

Domains in the same chain:

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e3i20E1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e3i2001 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i2021 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3i2031 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3i2041 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3i20C1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3i20C2 C:125-271 SH3 SH3 SH3
e3i20E1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3i20F1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3i20G2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i20G1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i20H2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3i20I2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3i20I1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3i20J1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3i20K1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3i20N1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3i20O1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3i20R1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3i20S1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3i20T1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3i20U1 U:1-102 SH3 SH3 SH3
e3i20V1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3i20W1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3i20X1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3i20Y1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3i20Z1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3i20E1 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dmgA1 E:X,Y,Z->L:x,y,z Ribosomal protein L4 Interaction Interface Pymol