Domain ID e3i2201

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L32p
UID: 000371664
Type: Automatic domain
Parent: e2j0151
Range: 0:1-56
PDB: 3i22
PDB Description:
Species:

Structure of domain e3i2201

Domains in the same chain:

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e3i2201 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3i2201 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i2221 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3i2231 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3i2241 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3i22C1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3i22C2 C:125-271 SH3 SH3 SH3
e3i22E1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3i22F1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3i22G2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i22G1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i22H2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3i22I2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3i22I1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3i22J1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3i22K1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3i22N1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3i22O1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3i22R1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3i22S1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3i22T1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3i22U1 U:1-102 SH3 SH3 SH3
e3i22V1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3i22W1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3i22X1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3i22Y1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3i22Z1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3i2201 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3i22S1 0:x,y,z->S:X,Y,Z Ribosomal protein L22 Interaction Interface Pymol
e3i22N1 0:x,y,z->N:X,Y,Z Prokaryotic ribosomal protein L17 Interaction Interface Pymol
e3i22N1 0:x,y,z->Q:X,Y,Z Prokaryotic ribosomal protein L17 Interaction Interface Pymol